STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT71218.1Decarboxylase. (242 aa)    
Predicted Functional Partners:
GAT68276.1
coA-binding protein.
    
   0.853
GAT66468.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.777
GAT67100.1
Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.775
GAT71219.1
MFS transporter.
       0.628
GAT71217.1
Transcriptional regulator.
       0.550
GAT70958.1
Ribose 5-phosphate isomerase.
  
 
 0.543
GAT66063.1
Glycerol-3-phosphate dehydrogenase.
 
  
 0.460
GAT66472.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.456
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.412
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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