STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001528665_00502Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_001528665_00500
Unannotated protein.
 
  
  0.811
GCA_001528665_00501
Unannotated protein.
 
     0.809
GCA_001528665_00499
Unannotated protein.
  
    0.776
GCA_001528665_07649
Unannotated protein.
   
 0.601
GCA_001528665_00503
Unannotated protein.
       0.553
GCA_001528665_00505
Unannotated protein.
    
  0.509
GCA_001528665_03839
Unannotated protein.
  
  
  0.476
GCA_001528665_00504
Unannotated protein.
       0.465
GCA_001528665_00467
Unannotated protein.
     
 0.429
Your Current Organism:
Microtetraspora malaysiensis
NCBI taxonomy Id: 161358
Other names: DSM 44579, JCM 11278, M. malaysiensis, Microtetraspora malaysiensis Nakajima et al. 2004, NBRC 100735, strain H47-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.