STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001528665_00731Unannotated protein. (365 aa)    
Predicted Functional Partners:
GCA_001528665_00729
Unannotated protein.
    0.987
GCA_001528665_01690
Unannotated protein.
 
 
  0.940
GCA_001528665_00750
Unannotated protein.
 
 
  0.938
GCA_001528665_00730
Unannotated protein.
 
    0.890
GCA_001528665_02993
Unannotated protein.
 
 
  0.866
GCA_001528665_02935
Unannotated protein.
 
 
  0.803
GCA_001528665_05167
Unannotated protein.
  
     0.749
GCA_001528665_00437
Unannotated protein.
  
  
 0.725
GCA_001528665_01870
Unannotated protein.
     
 0.646
GCA_001528665_03018
Unannotated protein.
  
     0.545
Your Current Organism:
Microtetraspora malaysiensis
NCBI taxonomy Id: 161358
Other names: DSM 44579, JCM 11278, M. malaysiensis, Microtetraspora malaysiensis Nakajima et al. 2004, NBRC 100735, strain H47-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.