STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001528665_01199Unannotated protein. (699 aa)    
Predicted Functional Partners:
GCA_001528665_01198
Unannotated protein.
 
   0.806
GCA_001528665_05445
Unannotated protein.
  
 0.766
GCA_001528665_01200
Unannotated protein.
       0.757
GCA_001528665_02903
Unannotated protein.
  
  0.714
GCA_001528665_01907
Unannotated protein.
 
    0.662
GCA_001528665_01529
Unannotated protein.
 
  0.590
GCA_001528665_01201
Unannotated protein.
       0.540
GCA_001528665_02663
Unannotated protein.
  
     0.500
GCA_001528665_04258
Unannotated protein.
  
  0.492
GCA_001528665_05576
Unannotated protein.
  
  0.489
Your Current Organism:
Microtetraspora malaysiensis
NCBI taxonomy Id: 161358
Other names: DSM 44579, JCM 11278, M. malaysiensis, Microtetraspora malaysiensis Nakajima et al. 2004, NBRC 100735, strain H47-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.