STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001528665_03362Unannotated protein. (125 aa)    
Predicted Functional Partners:
GCA_001528665_03360
Unannotated protein.
       0.824
GCA_001528665_03361
Unannotated protein.
       0.796
GCA_001528665_03359
Unannotated protein.
       0.756
GCA_001528665_03358
Unannotated protein.
       0.726
GCA_001528665_00203
Unannotated protein.
  
     0.652
GCA_001528665_03363
Unannotated protein.
       0.582
GCA_001528665_01247
Unannotated protein.
   
    0.557
GCA_001528665_05555
Unannotated protein.
   
    0.557
GCA_001528665_03356
Unannotated protein.
       0.534
GCA_001528665_05291
Unannotated protein.
  
     0.483
Your Current Organism:
Microtetraspora malaysiensis
NCBI taxonomy Id: 161358
Other names: DSM 44579, JCM 11278, M. malaysiensis, Microtetraspora malaysiensis Nakajima et al. 2004, NBRC 100735, strain H47-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.