STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001528665_03479Unannotated protein. (139 aa)    
Predicted Functional Partners:
GCA_001528665_06782
Unannotated protein.
    
 
 0.961
GCA_001528665_01543
Unannotated protein.
  
 
 0.951
GCA_001528665_05445
Unannotated protein.
   
 0.926
GCA_001528665_07130
Unannotated protein.
   
 0.774
GCA_001528665_07193
Unannotated protein.
   
 0.774
GCA_001528665_06040
Unannotated protein.
    
  0.762
GCA_001528665_07286
Unannotated protein.
    
  0.762
GCA_001528665_07158
Unannotated protein.
  
 
 0.753
GCA_001528665_03367
Unannotated protein.
  
  0.746
GCA_001528665_03371
Unannotated protein.
  
  0.746
Your Current Organism:
Microtetraspora malaysiensis
NCBI taxonomy Id: 161358
Other names: DSM 44579, JCM 11278, M. malaysiensis, Microtetraspora malaysiensis Nakajima et al. 2004, NBRC 100735, strain H47-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.