Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO41585.1Hypothetical protein; Pfam:pfam00932 Lamin Tail Domain. (273 aa)    
Predicted Functional Partners:
ALO41584.1
Pfam:pfam00182 Chitinase class I.
       0.773
ALO41586.1
Hypothetical protein.
       0.746
ALO41644.1
Pfam:pfam11655 Protein of unknown function (DUF2589).
  
     0.719
ALO40985.1
Bmp1; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.711
ALO40991.1
Bmp7; Pfam:pfam00067 Cytochrome P450.
  
     0.710
ALO41669.1
Pfam:pfam11747 Killing trait.
  
     0.639
ALO40990.1
Bmp6; Pfam:pfam01947 Protein of unknown function (DUF98).
 
     0.635
ALO41668.1
Pfam:pfam11747 Killing trait.
  
     0.618
ALO40986.1
Bmp2; Pfam:pfam01494 FAD binding domain.
  
     0.608
ALO43172.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.588
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.