STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO41639.1Hypothetical protein; Pfam:pfam13302 Acetyltransferase (GNAT) domain. (169 aa)    
Predicted Functional Partners:
ALO41638.1
Pfam:pfam13460 NADH(P)-binding.
       0.705
ALO41640.1
Hypothetical protein.
       0.586
ALO41644.1
Pfam:pfam11655 Protein of unknown function (DUF2589).
  
     0.583
ALO40990.1
Bmp6; Pfam:pfam01947 Protein of unknown function (DUF98).
  
     0.467
ALO41637.1
Hypothetical protein.
       0.452
ALO41725.1
Hypothetical protein.
  
    0.450
ALO40985.1
Bmp1; Pfam:pfam12697 Alpha/beta hydrolase family.
  
    0.424
ALO41585.1
Hypothetical protein; Pfam:pfam00932 Lamin Tail Domain.
 
    0.412
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.