Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALO40699.1 | ALO41660.1 | PP2015_171 | PP2015_1144 | XRE family transcriptional regulator; Pfam:pfam12844 Helix-turn-helix domain. | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | 0.497 |
ALO41659.1 | ALO41660.1 | PP2015_1143 | PP2015_1144 | DSBH domain containing protein; Pfam:pfam07883 Cupin domain. | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | 0.434 |
ALO41660.1 | ALO40699.1 | PP2015_1144 | PP2015_171 | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | XRE family transcriptional regulator; Pfam:pfam12844 Helix-turn-helix domain. | 0.497 |
ALO41660.1 | ALO41659.1 | PP2015_1144 | PP2015_1143 | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | DSBH domain containing protein; Pfam:pfam07883 Cupin domain. | 0.434 |
ALO41660.1 | ALO41661.1 | PP2015_1144 | PP2015_1145 | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | Pfam:pfam11196 Protein of unknown function (DUF2834). | 0.485 |
ALO41660.1 | lspA | PP2015_1144 | PP2015_1161 | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.441 |
ALO41661.1 | ALO41660.1 | PP2015_1145 | PP2015_1144 | Pfam:pfam11196 Protein of unknown function (DUF2834). | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | 0.485 |
lspA | ALO41660.1 | PP2015_1161 | PP2015_1144 | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | GTP-binding protein; Pfam:pfam09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). | 0.441 |