Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO40664.1Histidine triad protein; Pfam:pfam11969 Scavenger mRNA decapping enzyme C-term binding. (123 aa)    
Predicted Functional Partners:
ALO43546.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
   
   0.769
ALO40665.1
Pfam:pfam09829 Uncharacterized protein conserved in bacteria (DUF2057); Belongs to the UPF0319 family.
       0.585
ALO40663.1
Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
       0.467
ALO40662.1
Control sensor/kinase (ArcB, TorS, ChiS, LuxQ, BvgS); Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.406
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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