STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO42137.1Pfam:pfam00535 Glycosyl transferase family 2. (313 aa)    
Predicted Functional Partners:
ALO42129.1
Intercellular adhesion protein A; Pfam:pfam02397 Bacterial sugar transferase.
 
 
 0.882
ALO42136.1
Glycosyltransferase; Pfam:pfam00534 Glycosyl transferases group 1.
 
 
 0.835
ALO40939.1
Exopolysaccharide biosynthesis protein, putative; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.834
ALO42134.1
Pfam:pfam04932 O-Antigen ligase.
 
  
 0.789
ALO42135.1
Hypothetical protein; Pfam:pfam13440 Polysaccharide biosynthesis protein.
 
  
 0.788
ALO42133.1
Acetyltransferase; Pfam:pfam00132 Bacterial transferase hexapeptide (six repeats).
 
  
 0.699
ALO42126.1
Pfam:pfam02563 Polysaccharide biosynthesis/export protein.
 
  
 0.693
ALO42131.1
Polysaccharide export protein.
 
  
 0.690
ALO42132.1
Glycosyltransferase; Pfam:pfam13692 Glycosyl transferases group 1.
 
 
 0.659
ALO42154.1
Glycosyltransferase; Pfam:pfam00534 Glycosyl transferases group 1.
 
 
 0.631
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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