STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO42425.1PrkA family serine protein kinase; Pfam:pfam08298 PrkA AAA domain. (640 aa)    
Predicted Functional Partners:
ALO42426.1
Pfam:pfam04285 Protein of unknown function (DUF444); Belongs to the UPF0229 family.
 
  
 0.997
ALO42427.1
Pfam:pfam04293 SpoVR like protein.
 
  
 0.995
ALO42424.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.742
ALO44635.1
Pfam:pfam08323 Starch synthase catalytic domain.
   
    0.627
ALO43709.1
DNA-binding DPS protein; Pfam:pfam00210 Ferritin-like domain; Belongs to the Dps family.
   
    0.564
ALO44145.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
  
 0.533
ALO42438.1
Trp operon repressor; Pfam:pfam03358 NADPH-dependent FMN reductase.
   
    0.521
ALO42926.1
Pfam:pfam02562 PhoH-like protein.
   
  
 0.520
ALO42303.1
Fructosamine-3-kinase; Pfam:pfam03881 Fructosamine kinase.
   
    0.511
ALO42544.1
Leucine dehydrogenase; Pfam:pfam02812 Glu/Leu/Phe/Val dehydrogenase, dimerization domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.487
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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