STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO42956.1Hypothetical protein; Pfam:pfam14467 Domain of unknown function (DUF4426). (144 aa)    
Predicted Functional Partners:
ALO42957.1
Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
    0.947
ALO42958.1
HemN family oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.896
ALO42955.1
Integral membrane resistance protein; Pfam:pfam02325 YGGT family.
       0.886
proC
Pyrroline-5-carboxylate reductase (NAD(P)-binding) protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.882
ALO42953.1
PLP-binding domain-containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.869
ALO42959.1
Lipoprotein; Pfam:pfam05960 Bacterial protein of unknown function (DUF885).
       0.815
ALO42952.1
Twitching motility protein PilT; Pfam:pfam00437 Type II/IV secretion system protein.
       0.798
ALO42950.1
Hypothetical protein.
       0.780
ALO42951.1
Twitching motility protein PilU; Pfam:pfam00437 Type II/IV secretion system protein.
       0.702
ALO41888.1
Pfam:pfam03597 Cytochrome oxidase maturation protein cbb3-type.
  
     0.662
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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