STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO43021.1Phage shock protein; Pfam:pfam04012 PspA/IM30 family. (220 aa)    
Predicted Functional Partners:
ALO43019.1
Transcriptional activator of the psp operon with PspB, phage shock protein; Pfam:pfam04024 PspC domain.
 
 
 0.996
ALO43020.1
Pfam:pfam06667 Phage shock protein B.
 
 
 0.996
ALO43022.1
Psp operon transcriptional activator PspF; Pfam:pfam00158 Sigma-54 interaction domain.
 
 
   0.888
ALO40920.1
Phage shock domain-containing protein; Pfam:pfam04024 PspC domain.
  
 
 0.843
ALO43023.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.829
ALO42215.1
Diguanylate cyclase; Pfam:pfam00563 EAL domain.
  
 
 0.793
ALO43024.1
Peptide ABC transporter; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.793
ALO43025.1
Peptide ABC transporter; Pfam:pfam12911 N-terminal TM domain of oligopeptide transport permease C.
       0.793
ALO43026.1
Peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.793
ALO43027.1
Peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
       0.793
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.