STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO43379.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
ALO43378.1
Pfam:pfam04973 Nicotinamide mononucleotide transporter.
 
     0.970
ALO43377.1
Hypothetical protein; Pfam:pfam01636 Phosphotransferase enzyme family.
 
     0.831
ALO43463.1
Pfam:pfam00593 TonB dependent receptor.
 
     0.787
ALO43380.1
Hypothetical protein; Pfam:pfam12680 SnoaL-like domain.
       0.781
ALO40924.1
Hypothetical protein.
  
     0.616
ALO43381.1
Twin-arginine translocation pathway signal; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
       0.584
ALO43976.1
Pfam:pfam00924 Mechanosensitive ion channel.
 
     0.489
ALO44254.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
     0.467
ALO43501.1
Arginase/agmatinase/formiminoglutamase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
  
     0.439
ALO43370.1
Outer membrane protein (Porin); Pfam:pfam13609 Gram-negative porin.
  
     0.413
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.