STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO43527.1SCO1/SenC protein (Copper-binding protein); Pfam:pfam02630 SCO1/SenC. (196 aa)    
Predicted Functional Partners:
ALO43535.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.986
ALO43529.1
Pfam:pfam02628 Cytochrome oxidase assembly protein.
 
 
 0.963
ALO43533.1
Pfam:pfam04442 Cytochrome c oxidase assembly protein CtaG/Cox11.
 
 
 0.962
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.952
ALO43531.1
Transmembrane cytochrome oxidase complex biogenesis factor; Pfam:pfam02104 SURF1 family.
 
  
 0.944
ALO43534.1
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
  
 0.929
ALO43532.1
Pfam:pfam00510 Cytochrome c oxidase subunit III.
 
  
 0.928
ALO43530.1
Transmembrane cytochrome oxidase associated protein.
       0.896
ALO43450.1
Thioredoxin family protein; Pfam:pfam00578 AhpC/TSA family.
 
 
 0.838
ALO41489.1
Thiol:disulfide interchange protein DsbE; Pfam:pfam08534 Redoxin.
 
 
 0.807
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.