STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO43681.1Peptidase S9; Pfam:pfam00326 Prolyl oligopeptidase family. (649 aa)    
Predicted Functional Partners:
ALO44027.1
Peptidase S15; Pfam:pfam00326 Prolyl oligopeptidase family.
  
     0.755
ALO41872.1
Transport protein; Pfam:pfam12698 ABC-2 family transporter protein.
  
     0.489
ALO43682.1
Peptidase S9; Pfam:pfam00326 Prolyl oligopeptidase family.
 
    
0.482
ALO42007.1
Putative lipoprotein; Pfam:pfam05960 Bacterial protein of unknown function (DUF885).
  
     0.461
ALO43683.1
Pfam:pfam05960 Bacterial protein of unknown function (DUF885).
 
     0.426
ALO41870.1
Pfam:pfam08386 TAP-like protein.
  
     0.418
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.