Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO40847.1Lipoprotein; Pfam:pfam04348 LppC putative lipoprotein. (628 aa)    
Predicted Functional Partners:
ALO43487.1
Murein polymerase; Pfam:pfam00912 Transglycosylase.
  
 
 
 0.876
ALO40845.1
DnaA initiator-associating protein DiaA; Pfam:pfam13580 SIS domain.
  
    0.853
ALO40846.1
Pfam:pfam02021 Uncharacterized protein family UPF0102; Belongs to the UPF0102 family.
  
  
 0.847
ALO40844.1
Hypothetical protein; Pfam:pfam04972 BON domain.
  
    0.838
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
   
 0.723
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.716
PP2015_59
Uroporphyrinogen-III synthase; Pfam:pfam04375 HemX.
  
     0.627
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
    0.597
ALO42850.1
Pfam:pfam09839 Uncharacterized protein conserved in bacteria (DUF2066).
  
     0.579
ALO42580.1
FimV N-terminal domain protein.
  
     0.562
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.