STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO43709.1DNA-binding DPS protein; Pfam:pfam00210 Ferritin-like domain; Belongs to the Dps family. (157 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.818
ALO42429.1
Pfam:pfam00072 Response regulator receiver domain.
    
   0.631
ALO42438.1
Trp operon repressor; Pfam:pfam03358 NADPH-dependent FMN reductase.
  
  
 0.618
ALO40650.1
Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.594
ALO43042.1
Peroxiredoxin 2; Pfam:pfam00578 AhpC/TSA family.
  
  
 0.594
ALO42425.1
PrkA family serine protein kinase; Pfam:pfam08298 PrkA AAA domain.
   
    0.564
ALO44226.1
Pfam:pfam03358 NADPH-dependent FMN reductase.
  
  
 0.547
ALO40818.1
Ribosome hibernation promoting factor HPF; Pfam:pfam02482 Sigma 54 modulation protein / S30EA ribosomal protein.
  
    0.528
ALO41273.1
Pfam:pfam02482 Sigma 54 modulation protein / S30EA ribosomal protein.
  
    0.528
ALO41880.1
Pfam:pfam11813 Protein of unknown function (DUF3334).
    
   0.519
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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