STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO43723.1Hypothetical protein; Pfam:pfam13485 Peptidase MA superfamily. (957 aa)    
Predicted Functional Partners:
ALO41302.1
Lipoprotein.
  
     0.759
ALO41865.1
Hypothetical protein.
  
    0.754
ALO42104.1
Hypothetical protein.
 
     0.753
ALO43066.1
Pfam:pfam05193 Peptidase M16 inactive domain.
  
    0.736
ALO43296.1
Hypothetical protein.
  
     0.716
ALO42638.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
     0.699
ALO42944.1
Hypothetical protein.
  
     0.681
ALO42440.1
Ankyrin repeat-containing protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
     0.664
ALO43471.1
Hypothetical protein; Pfam:pfam08668 HDOD domain.
  
     0.658
PP2015_15
Pfam:pfam12945 Flagellar protein YcgR.
  
     0.653
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.