STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO43725.1Pfam:pfam01263 Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (283 aa)    
Predicted Functional Partners:
ALO42237.1
Pfam:pfam02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III.
     
 0.916
pgi
Pfam:pfam00342 Phosphoglucose isomerase; Belongs to the GPI family.
  
 
 0.914
glk
Glucokinase; Pfam:pfam02685 Glucokinase; Belongs to the bacterial glucokinase family.
    
  0.903
glk-2
Glucokinase; Pfam:pfam02685 Glucokinase; Belongs to the bacterial glucokinase family.
    
  0.903
glk-3
Glucokinase; Pfam:pfam02685 Glucokinase; Belongs to the bacterial glucokinase family.
    
  0.903
ALO41901.1
PTS system protein; Pfam:pfam00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.
     
  0.900
ALO41789.1
Pfam:pfam01081 KDPG and KHG aldolase.
    
 0.814
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
  0.804
ALO43184.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.803
ALO41434.1
1-deoxy-D-xylulose-5-phosphate synthase; Pfam:pfam02779 Transketolase, pyrimidine binding domain.
     
 0.803
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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