Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALO40857.1 | ALO40858.1 | PP2015_331 | PP2015_332 | ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3. | Endoglucanase. | 0.437 |
ALO40858.1 | ALO40857.1 | PP2015_332 | PP2015_331 | Endoglucanase. | ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3. | 0.437 |
ALO40858.1 | ALO42054.1 | PP2015_332 | PP2015_1550 | Endoglucanase. | Cell division protein ATPase; Pfam:pfam01580 FtsK/SpoIIIE family. | 0.630 |
ALO40858.1 | ALO42203.1 | PP2015_332 | PP2015_1701 | Endoglucanase. | Endoglucanase; Pfam:pfam03160 Calx-beta domain. | 0.414 |
ALO40858.1 | ALO42580.1 | PP2015_332 | PP2015_2082 | Endoglucanase. | FimV N-terminal domain protein. | 0.486 |
ALO40858.1 | ALO42664.1 | PP2015_332 | PP2015_2167 | Endoglucanase. | Parallel beta-helix repeat-containing protein; Pfam:pfam14238 Domain of unknown function (DUF4340). | 0.549 |
ALO40858.1 | ALO42665.1 | PP2015_332 | PP2015_2168 | Endoglucanase. | Hypothetical protein; Pfam:pfam09822 ABC-type uncharacterized transport system. | 0.527 |
ALO40858.1 | ALO43567.1 | PP2015_332 | PP2015_3088 | Endoglucanase. | Hypothetical protein. | 0.488 |
ALO40858.1 | ALO43996.1 | PP2015_332 | PP2015_3522 | Endoglucanase. | Pfam:pfam11185 Protein of unknown function (DUF2971). | 0.419 |
ALO40858.1 | ALO44350.1 | PP2015_332 | PP2015_3881 | Endoglucanase. | Amino acid adenylation domain/thioester reductase domain protein; Pfam:pfam00501 AMP-binding enzyme. | 0.457 |
ALO40858.1 | PP2015_35 | PP2015_332 | PP2015_35 | Endoglucanase. | Serine endoprotease; Pfam:pfam00082 Subtilase family; Belongs to the peptidase S8 family. | 0.431 |
ALO42054.1 | ALO40858.1 | PP2015_1550 | PP2015_332 | Cell division protein ATPase; Pfam:pfam01580 FtsK/SpoIIIE family. | Endoglucanase. | 0.630 |
ALO42203.1 | ALO40858.1 | PP2015_1701 | PP2015_332 | Endoglucanase; Pfam:pfam03160 Calx-beta domain. | Endoglucanase. | 0.414 |
ALO42580.1 | ALO40858.1 | PP2015_2082 | PP2015_332 | FimV N-terminal domain protein. | Endoglucanase. | 0.486 |
ALO42664.1 | ALO40858.1 | PP2015_2167 | PP2015_332 | Parallel beta-helix repeat-containing protein; Pfam:pfam14238 Domain of unknown function (DUF4340). | Endoglucanase. | 0.549 |
ALO42664.1 | ALO42665.1 | PP2015_2167 | PP2015_2168 | Parallel beta-helix repeat-containing protein; Pfam:pfam14238 Domain of unknown function (DUF4340). | Hypothetical protein; Pfam:pfam09822 ABC-type uncharacterized transport system. | 0.960 |
ALO42665.1 | ALO40858.1 | PP2015_2168 | PP2015_332 | Hypothetical protein; Pfam:pfam09822 ABC-type uncharacterized transport system. | Endoglucanase. | 0.527 |
ALO42665.1 | ALO42664.1 | PP2015_2168 | PP2015_2167 | Hypothetical protein; Pfam:pfam09822 ABC-type uncharacterized transport system. | Parallel beta-helix repeat-containing protein; Pfam:pfam14238 Domain of unknown function (DUF4340). | 0.960 |
ALO43567.1 | ALO40858.1 | PP2015_3088 | PP2015_332 | Hypothetical protein. | Endoglucanase. | 0.488 |
ALO43996.1 | ALO40858.1 | PP2015_3522 | PP2015_332 | Pfam:pfam11185 Protein of unknown function (DUF2971). | Endoglucanase. | 0.419 |
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