Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO40865.1Hypothetical protein; Pfam:pfam06468 Spondin_N. (236 aa)    
Predicted Functional Partners:
ALO40863.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
   0.922
ALO40866.1
Hypothetical protein; Pfam:pfam06468 Spondin_N.
 
    
0.893
ALO40864.1
Two component transcriptional regulator, winged helix family protein; Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
 
     0.813
ALO41725.1
Hypothetical protein.
  
     0.680
ALO40867.1
Pfam:pfam00126 Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
       0.495
ALO41178.1
Enterobactin receptor VctA; Pfam:pfam00593 TonB dependent receptor.
  
 
   0.486
ALO44160.1
Zn-dependent hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
  
     0.479
ALO42054.1
Cell division protein ATPase; Pfam:pfam01580 FtsK/SpoIIIE family.
    
 
 0.477
ALO41239.1
Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.432
ALO44012.1
Pfam:pfam00593 TonB dependent receptor.
  
 
   0.412
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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