Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ALO40873.1Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family. (287 aa)    
Predicted Functional Partners:
ALO40872.1
Transcriptional regulator.
 
     0.924
ALO41024.1
4Fe-4S ferredoxin.
   
   0.777
ALO41638.1
Pfam:pfam13460 NADH(P)-binding.
  
   0.750
ALO44350.1
Amino acid adenylation domain/thioester reductase domain protein; Pfam:pfam00501 AMP-binding enzyme.
   
 
 0.665
ALO40841.1
Pfam:pfam02167 Cytochrome C1 family.
   
  
 0.524
ALO40871.1
Sensory box histidine kinase/response regulator; Pfam:pfam00072 Response regulator receiver domain.
       0.468
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.467
ALO43819.1
Hypothetical protein.
   
   0.467
ALO41430.1
Acyl carrier protein.
   
   0.467
ALO40874.1
Hypothetical protein.
       0.456
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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