Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALO41601.1 | ALO43966.1 | PP2015_1085 | PP2015_3491 | Pfam:pfam01037 AsnC family. | Pfam:pfam04339 Protein of unknown function, DUF482. | 0.588 |
ALO41601.1 | ALO44000.1 | PP2015_1085 | PP2015_3526 | Pfam:pfam01037 AsnC family. | Lysophospholipase; Pfam:pfam12697 Alpha/beta hydrolase family. | 0.588 |
ALO43965.1 | ALO43966.1 | PP2015_3490 | PP2015_3491 | Methylase; Pfam:pfam06080 Protein of unknown function (DUF938). | Pfam:pfam04339 Protein of unknown function, DUF482. | 0.434 |
ALO43966.1 | ALO41601.1 | PP2015_3491 | PP2015_1085 | Pfam:pfam04339 Protein of unknown function, DUF482. | Pfam:pfam01037 AsnC family. | 0.588 |
ALO43966.1 | ALO43965.1 | PP2015_3491 | PP2015_3490 | Pfam:pfam04339 Protein of unknown function, DUF482. | Methylase; Pfam:pfam06080 Protein of unknown function (DUF938). | 0.434 |
ALO43966.1 | ALO44000.1 | PP2015_3491 | PP2015_3526 | Pfam:pfam04339 Protein of unknown function, DUF482. | Lysophospholipase; Pfam:pfam12697 Alpha/beta hydrolase family. | 0.601 |
ALO43966.1 | bpt | PP2015_3491 | PP2015_1494 | Pfam:pfam04339 Protein of unknown function, DUF482. | Putative arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.430 |
ALO44000.1 | ALO41601.1 | PP2015_3526 | PP2015_1085 | Lysophospholipase; Pfam:pfam12697 Alpha/beta hydrolase family. | Pfam:pfam01037 AsnC family. | 0.588 |
ALO44000.1 | ALO43966.1 | PP2015_3526 | PP2015_3491 | Lysophospholipase; Pfam:pfam12697 Alpha/beta hydrolase family. | Pfam:pfam04339 Protein of unknown function, DUF482. | 0.601 |
bpt | ALO43966.1 | PP2015_1494 | PP2015_3491 | Putative arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Pfam:pfam04339 Protein of unknown function, DUF482. | 0.430 |