STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO44046.1GCN5-like N-acetyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. (163 aa)    
Predicted Functional Partners:
ALO44047.1
Hypothetical protein; Pfam:pfam10000 ACT domain.
       0.773
ALO44048.1
Type 11 methyltransferase; Pfam:pfam12847 Methyltransferase domain.
       0.762
ALO44045.1
Aldehyde-activating protein.
       0.757
ALO44049.1
Racemase; Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
       0.520
ALO44050.1
Hypothetical protein.
       0.520
ALO44044.1
SAM-dependent methyltransferase.
       0.510
ALO41810.1
Integrase.
  
     0.428
ALO40866.1
Hypothetical protein; Pfam:pfam06468 Spondin_N.
  
     0.403
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.