STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO44076.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
ALO42054.1
Cell division protein ATPase; Pfam:pfam01580 FtsK/SpoIIIE family.
    
 
 0.630
ALO43400.1
Hypothetical protein; Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
 
   0.531
ALO42580.1
FimV N-terminal domain protein.
    
 
 0.486
ALO44350.1
Amino acid adenylation domain/thioester reductase domain protein; Pfam:pfam00501 AMP-binding enzyme.
   
 
 0.457
ALO43567.1
Hypothetical protein.
    
 
 0.421
ALO42727.1
Ligand-gated channel; Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
 
   0.418
ALO42203.1
Endoglucanase; Pfam:pfam03160 Calx-beta domain.
    
   0.414
ALO43984.1
Hypothetical protein; Pfam:pfam03160 Calx-beta domain.
    
   0.414
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.