STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO44109.1Amino acid-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3. (266 aa)    
Predicted Functional Partners:
ALO44401.1
ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.740
ALO42228.1
Hypothetical protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.722
ALO40857.1
ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.707
ALO44074.1
Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.707
ALO44258.1
ABC-type amino acid transport protein; Signal transduction systems, periplasmic component/domain protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.703
ALO43927.1
Amino acid ABC transporter periplasmic protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.694
ALO44066.1
ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.692
ALO44591.1
ABC-type amino acid transport protein; Signal transduction systems, periplasmic component/domain protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.669
ALO40745.1
Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.667
ALO43675.1
Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
  
     0.667
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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