Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO40893.1Pfam:pfam05258 Protein of unknown function (DUF721). (161 aa)    
Predicted Functional Partners:
ALO40792.1
DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
    
   0.830
ALO41566.1
Pfam:pfam07445 Primosomal replication protein priB and priC.
  
     0.755
ALO41260.1
Putative N-ribosylNicotinamide CRP-like regulator; Pfam:pfam00027 Cyclic nucleotide-binding domain.
  
     0.748
ALO42120.1
Pfam:pfam10972 Protein of unknown function (DUF2803).
  
     0.658
ALO43479.1
DamX-like protein; Pfam:pfam13401 AAA domain.
  
     0.658
ALO43119.1
TPR repeat-containing transcriptional regulator; Pfam:pfam13371 Tetratricopeptide repeat.
  
     0.653
ALO41865.1
Hypothetical protein.
  
     0.649
ALO41976.1
Hypothetical protein.
  
     0.643
ALO43410.1
Putative integral membrane protein.
  
     0.632
ALO40781.1
Primosomal replication protein n.
  
     0.619
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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