STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO44159.1YHS domain-containing protein; Pfam:pfam04945 YHS domain. (155 aa)    
Predicted Functional Partners:
ALO43322.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
   0.786
ALO44160.1
Zn-dependent hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
       0.511
ALO41416.1
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal; Belongs to the flagella basal body rod proteins family.
    
   0.469
ALO44161.1
Hypothetical protein; Pfam:pfam09994 Uncharacterized alpha/beta hydrolase domain (DUF2235).
       0.449
azoR-2
FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
 
     0.445
ALO43097.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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