STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP2015_38D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase; Pfam:pfam02152 Dihydroneopterin aldolase. (120 aa)    
Predicted Functional Partners:
folE
Pfam:pfam01227 GTP cyclohydrolase I.
  
 
 0.997
PP2015_40
Dehydrogenase; Pfam:pfam00106 short chain dehydrogenase.
 
     0.924
folE2
GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate.
    
 0.903
folE2-2
GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate.
    
 0.903
ALO41704.1
Pfam:pfam09423 PhoD-like phosphatase.
     
 0.902
ALO43728.1
Pfam:pfam09423 PhoD-like phosphatase.
     
 0.902
ALO41324.1
Pfam:pfam09423 PhoD-like phosphatase.
     
 0.902
ALO44665.1
Pfam:pfam00245 Alkaline phosphatase; Belongs to the alkaline phosphatase family.
     
  0.900
ALO41325.1
Pfam:pfam00245 Alkaline phosphatase; Belongs to the alkaline phosphatase family.
     
  0.900
ALO41855.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
  
 0.825
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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