STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO44580.1Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. (467 aa)    
Predicted Functional Partners:
ALO44578.1
Porin; Pfam:pfam13609 Gram-negative porin.
       0.641
ALO44579.1
Anion transporter; Pfam:pfam00939 Sodium:sulfate symporter transmembrane region.
  
    0.640
ALO41055.1
Sensory box histidine kinase/response regulator; Pfam:pfam12860 PAS fold.
  
 
 0.502
ALO44350.1
Amino acid adenylation domain/thioester reductase domain protein; Pfam:pfam00501 AMP-binding enzyme.
  
 
 0.468
ALO43815.1
Preprotein translocase subunit Tim44; Pfam:pfam00501 AMP-binding enzyme.
   
 
 0.462
ALO41441.1
Pfam:pfam04443 Acyl-protein synthetase, LuxE.
   
 
 0.462
ALO42390.1
Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.447
ALO43813.1
Hypothetical protein.
  
 
 0.407
pckA
Phosphoenolpyruvate carboxykinase ATP; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
  
  
 0.400
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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