STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO44604.1Pfam:pfam13302 Acetyltransferase (GNAT) domain. (174 aa)    
Predicted Functional Partners:
ALO44302.1
Pfam:pfam13302 Acetyltransferase (GNAT) domain.
 
   
 0.611
ALO41700.1
Acetyltransferase, GNAT family; Pfam:pfam13302 Acetyltransferase (GNAT) domain.
  
     0.574
ALO44603.1
Hypothetical protein.
       0.486
ALO44602.1
Bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic; Pfam:pfam02872 5'-nucleotidase, C-terminal domain; Belongs to the 5'-nucleotidase family.
 
     0.458
ALO44311.1
Zinc metalloprotease (Elastase); Pfam:pfam02868 Thermolysin metallopeptidase, alpha-helical domain.
  
     0.427
ALO41349.1
N-acetylglutamate synthase related acetyltransferase; Pfam:pfam00583 Acetyltransferase (GNAT) family.
 
     0.410
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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