Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO40953.1Pfam:pfam00535 Glycosyl transferase family 2. (331 aa)    
Predicted Functional Partners:
ALO40952.1
Lipopolysaccharide core biosynthesis protein WbcM; Pfam:pfam00534 Glycosyl transferases group 1.
 
  
 0.846
ALO40955.1
Putative O-antigen acetylase PatA; Pfam:pfam00132 Bacterial transferase hexapeptide (six repeats).
  
  
 0.769
ALO40954.1
Asparagine synthetase; Pfam:pfam13537 Glutamine amidotransferase domain.
  
    0.763
ALO40951.1
Hypothetical protein; Pfam:pfam14897 EpsG family.
       0.752
ALO40950.1
Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
  
  
 0.709
ALO40939.1
Exopolysaccharide biosynthesis protein, putative; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.703
ALO40956.1
Lipopolysaccharide biosynthesis protein.
     
 0.702
ALO42129.1
Intercellular adhesion protein A; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.661
ALO40942.1
Tyrosine-protein kinase; Pfam:pfam13807 G-rich domain on putative tyrosine kinase.
 
  
 0.644
ALO40946.1
Virulence factor MviN family protein; Pfam:pfam01943 Polysaccharide biosynthesis protein.
 
  
 0.638
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.