Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO40962.1Peptidase S8; Pfam:pfam00082 Subtilase family. (710 aa)    
Predicted Functional Partners:
ALO41959.1
Pfam:pfam00069 Protein kinase domain.
   
 
 0.573
PP2015_35
Serine endoprotease; Pfam:pfam00082 Subtilase family; Belongs to the peptidase S8 family.
  
   
 0.508
ALO42392.1
Serine protease; Pfam:pfam00082 Subtilase family.
  
     0.489
ALO43695.1
Periplasmic calcium binding protein; Pfam:pfam00932 Lamin Tail Domain.
  
     0.465
ALO44516.1
Hypothetical protein.
 
    0.465
ALO42700.1
Hypothetical protein.
 
    0.430
ALO44108.1
Collagenase; Pfam:pfam01752 Collagenase.
 
  
 0.411
ALO41974.1
Chromosome segregation ATPase.
  
     0.407
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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