Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO40986.1Bmp2; Pfam:pfam01494 FAD binding domain. (406 aa)    
Predicted Functional Partners:
ALO40985.1
Bmp1; Pfam:pfam12697 Alpha/beta hydrolase family.
 
    0.871
ALO40988.1
Bmp4; Pfam:pfam00501 AMP-binding enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.818
ALO40991.1
Bmp7; Pfam:pfam00067 Cytochrome P450.
 
     0.805
ALO40987.1
Bmp3; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
  
 0.778
ALO40989.1
Bmp5; Pfam:pfam00743 Flavin-binding monooxygenase-like.
 
     0.704
ALO40990.1
Bmp6; Pfam:pfam01947 Protein of unknown function (DUF98).
 
     0.689
ALO41585.1
Hypothetical protein; Pfam:pfam00932 Lamin Tail Domain.
  
     0.608
ALO42025.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
  
 
 0.598
ALO40984.1
Bmp8.
 
     0.595
ALO42024.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.571
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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