Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALO41037.1Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (351 aa)    
Predicted Functional Partners:
ALO41036.1
AcrB/acrD/acrF acriflavin resistance protein; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.995
ALO44054.1
Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.969
ALO42940.1
Pfam:pfam02321 Outer membrane efflux protein.
 
 0.957
ALO41621.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.947
ALO42145.1
Efflux system inner membrane protein; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.931
ALO41561.1
Acriflavine resistance protein B; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.930
ALO41347.1
Acriflavin resistance protein; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.923
ALO43668.1
RND multidrug efflux transporter Acriflavin resistance protein; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.914
ALO42141.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Pfam:pfam02321 Outer membrane efflux protein.
  
 0.890
msrA-2
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.862
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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