STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO41057.1Pfam:pfam00474 Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (574 aa)    
Predicted Functional Partners:
ALO41056.1
Membrane protein; Pfam:pfam13937 Domain of unknown function (DUF4212).
 
     0.973
ALO41257.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.959
ALO41058.1
Inosine-5-monophosphate dehydrogenase; Pfam:pfam03445 Putative nucleotidyltransferase DUF294.
 
     0.877
ALO41059.1
DNA polymerase, exonuclease activity; Pfam:pfam00929 Exonuclease.
 
     0.682
ALO42893.1
Pfam:pfam02554 Carbon starvation protein CstA.
  
    0.543
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.517
ALO41055.1
Sensory box histidine kinase/response regulator; Pfam:pfam12860 PAS fold.
  
  
 0.515
ALO42215.1
Diguanylate cyclase; Pfam:pfam00563 EAL domain.
  
  
 0.490
ALO44118.1
Extracellular solute-binding protein; Pfam:pfam00375 Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
 
 0.471
ALO43813.1
Hypothetical protein.
  
  
 0.439
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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