STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO41098.1Regulatory protein. (283 aa)    
Predicted Functional Partners:
ALO41097.1
AmpD protein; Pfam:pfam01510 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.914
ALO41096.1
Nicotinate-nucleotide pyrophosphorylase; Pfam:pfam01729 Quinolinate phosphoribosyl transferase, C-terminal domain; Belongs to the NadC/ModD family.
     
 0.837
ALO42276.1
Pfam:pfam11949 Protein of unknown function (DUF3466).
  
     0.727
PP2015_84
Pfam:pfam11101 Protein of unknown function (DUF2884).
  
     0.674
ALO43471.1
Hypothetical protein; Pfam:pfam08668 HDOD domain.
  
     0.665
ALO40756.1
Pfam:pfam13116 Protein of unknown function.
  
     0.656
ALO42443.1
Pfam:pfam06804 NlpB/DapX lipoprotein.
  
     0.652
ALO41922.1
Hypothetical protein.
  
     0.597
ALO42828.1
Pfam:pfam13508 Acetyltransferase (GNAT) domain.
  
     0.586
ALO41042.1
Pfam:pfam11101 Protein of unknown function (DUF2884).
  
     0.584
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.