Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO41135.1Pfam:pfam05114 Protein of unknown function (DUF692). (316 aa)    
Predicted Functional Partners:
ALO41136.1
Pfam:pfam09836 Uncharacterized protein conserved in bacteria (DUF2063).
 
  
 0.982
ALO42531.1
Pfam:pfam09836 Uncharacterized protein conserved in bacteria (DUF2063).
 
  
 0.814
ALO41134.1
Hypothetical protein.
       0.788
ALO42150.1
Putative membrane protein; Pfam:pfam07681 DoxX.
 
  
 0.628
ALO43055.1
YD repeat-containing protein; Pfam:pfam03534 Salmonella virulence plasmid 65kDa B protein.
  
    0.558
ALO42409.1
Forkhead-associated protein; Pfam:pfam00498 FHA domain.
   
    0.516
ALO44537.1
Oxidoreductase; Pfam:pfam07681 DoxX.
  
  
 0.510
ALO41981.1
Hypothetical protein.
  
    0.467
ALO42338.1
Pfam:pfam04325 Protein of unknown function (DUF465).
  
     0.453
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.