Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO41200.1Glyoxalase family protein; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (166 aa)    
Predicted Functional Partners:
ALO41199.1
Pfam:pfam00126 Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.928
ALO42670.1
Hypothetical protein; Pfam:pfam14499 Domain of unknown function (DUF4437).
 
     0.629
ALO41219.1
Putative Short-chain dehydrogenase/reductase SDR; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.612
ALO41024.1
4Fe-4S ferredoxin.
  
    0.494
ALO42709.1
Alkyl hydroperoxide reductase; Pfam:pfam00578 AhpC/TSA family.
 
     0.468
ALO42631.1
1-deoxy-D-xylulose 5-phosphate synthase; Pfam:pfam00881 Nitroreductase family.
 
    0.458
birA
ArsR family transcriptional regulator; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
  
    0.413
ALO42149.1
Nitroreductase; Pfam:pfam00881 Nitroreductase family.
 
    0.408
ALO44449.1
Oxygen-insensitive NAD(P)H nitroreductase.
 
    0.405
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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