STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (381 aa)    
Predicted Functional Partners:
ALO41223.1
Pfam:pfam01087 Galactose-1-phosphate uridyl transferase, N-terminal domain.
 0.999
ALO41226.1
Galactose-1-epimerase; Pfam:pfam01263 Aldose 1-epimerase.
 0.996
ALO40917.1
UDP-galactose-4-epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.976
ALO41221.1
Beta-galactosidase; Pfam:pfam02836 Glycosyl hydrolases family 2, TIM barrel domain.
 
  
 0.874
ALO43381.1
Twin-arginine translocation pathway signal; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.837
ALO41225.1
Pfam:pfam00474 Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.792
ALO41222.1
HTH-type transcriptional regulator galR; Pfam:pfam13377 Periplasmic binding protein-like domain.
 
  
 0.718
ALO41901.1
PTS system protein; Pfam:pfam00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.
  
  
 0.513
ALO41903.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.512
ALO40945.1
dTDP-glucose 4,6-dehydratase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
  
 0.480
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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