Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO41314.1Diguanylate cyclase; Pfam:pfam00990 GGDEF domain. (345 aa)    
Predicted Functional Partners:
ALO42215.1
Diguanylate cyclase; Pfam:pfam00563 EAL domain.
 
 
 0.916
ALO40748.1
EAL domain-containing protein; Pfam:pfam00563 EAL domain.
 
  
 0.852
ALO40734.1
Diguanylate cyclase; Pfam:pfam00563 EAL domain.
 
    0.830
ALO40707.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; Pfam:pfam00563 EAL domain.
 
   0.810
ALO44122.1
Hypothetical protein; Pfam:pfam00563 EAL domain.
  
    0.800
ALO41939.1
EAL domain-containing protein; Pfam:pfam00563 EAL domain.
 
    0.796
ALO41798.1
Diguanylate cyclase/phosphodiesterase; Pfam:pfam00563 EAL domain.
  
    0.795
ALO42210.1
Pfam:pfam00563 EAL domain.
 
    0.785
ALO40927.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; Pfam:pfam00563 EAL domain.
  
    0.783
ALO43892.1
Hypothetical protein; Pfam:pfam00563 EAL domain.
  
   0.780
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.