STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO41321.1Transcriptional regulator; Pfam:pfam07702 UTRA domain. (237 aa)    
Predicted Functional Partners:
ALO41901.1
PTS system protein; Pfam:pfam00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.
 
  
 0.783
ALO43504.1
Histidine utilization repressor, proteobacterial; Pfam:pfam07702 UTRA domain.
  
   
 0.591
ALO41320.1
Hypothetical protein.
 
     0.559
ALO42336.1
N-acetylglucosamine-6-phosphate deacetylase; Pfam:pfam13147 Amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
 
  
 0.547
ALO42670.1
Hypothetical protein; Pfam:pfam14499 Domain of unknown function (DUF4437).
  
    0.508
ALO41322.1
Putative Fe transport outer membrane receptor protein; Pfam:pfam00593 TonB dependent receptor.
       0.488
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.472
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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