Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PP2015_88Long chain acyl-CoA desaturase; Pfam:pfam00487 Fatty acid desaturase. (381 aa)    
Predicted Functional Partners:
ALO41941.1
Pfam:pfam00487 Fatty acid desaturase.
  
 0.944
ALO41940.1
Pfam:pfam00970 Oxidoreductase FAD-binding domain.
  
  
  0.924
PP2015_89
DNA-binding transcriptional repressor FabR; Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
   
 0.866
sthA
Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.736
ALO44350.1
Amino acid adenylation domain/thioester reductase domain protein; Pfam:pfam00501 AMP-binding enzyme.
  
 
 0.660
ALO40991.1
Bmp7; Pfam:pfam00067 Cytochrome P450.
   
 0.513
ALO42843.1
Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
   0.460
ALO44126.1
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
    
   0.460
ALO41139.1
Pfam:pfam00487 Fatty acid desaturase.
  
 
 0.414
ALO42240.1
Pfam:pfam10981 Protein of unknown function (DUF2788).
  
     0.407
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
Server load: low (14%) [HD]