Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO41429.1Pfam:pfam01973 Protein of unknown function DUF115. (690 aa)    
Predicted Functional Partners:
ALO41426.1
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
     0.881
ALO41425.1
Pfam:pfam03646 FlaG protein.
 
     0.871
ALO41427.1
Flagellin-specific chaperone FliS; Pfam:pfam02561 Flagellar protein FliS.
       0.856
ALO41428.1
Hypothetical protein.
       0.785
ALO40956.1
Lipopolysaccharide biosynthesis protein.
  
  
 0.781
ALO41424.1
Flagellin protein FlaA; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.638
ALO41405.1
Pfam:pfam02169 LPP20 lipoprotein.
 
     0.634
ALO41445.1
Hypothetical protein; Pfam:pfam13302 Acetyltransferase (GNAT) domain.
 
   
 0.620
ALO41444.1
N-acetylneuraminate synthase; Pfam:pfam03102 NeuB family.
 
   
 0.612
ALO44168.1
Pfam:pfam04219 Protein of unknown function, DUF.
  
     0.595
Your Current Organism:
Pseudoalteromonas phenolica
NCBI taxonomy Id: 161398
Other names: IAM 14989, JCM 21460, KCTC 12086, P. phenolica, Pseudoalteromonas phenolica Isnansetyo and Kamei 2003, Pseudoalteromonas sp. O-BC30, strain O-BC30
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