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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13535.1Primosome component related protein. (236 aa)    
Predicted Functional Partners:
KRN13534.1
Hypothetical protein.
 
     0.848
KRN13390.1
Primosomal protein DnaI.
 
  
 0.820
dinG
ATP-dependent helicase DinG; 3'-5' exonuclease.
 
  
 0.763
KRN13389.1
Replication initiation and membrane attachment protein.
  
   
 0.728
KRN12726.1
Helicase domain-containing protein.
  
     0.587
KRN13416.1
Penicillin-binding protein transpeptidase.
  
    0.524
KRN12741.1
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.509
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.454
KRN13509.1
Hypothetical protein.
  
    0.451
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
  
    0.446
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.