Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN12653.1 | KRN13556.1 | IV37_GL000952 | IV37_GL000279 | X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. | Dyp-type peroxidase family protein. | 0.459 |
KRN12653.1 | ldh | IV37_GL000952 | IV37_GL001262 | X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. | Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate. | 0.530 |
KRN13555.1 | KRN13556.1 | IV37_GL000278 | IV37_GL000279 | HAD superfamily hydrolase. | Dyp-type peroxidase family protein. | 0.492 |
KRN13556.1 | KRN12653.1 | IV37_GL000279 | IV37_GL000952 | Dyp-type peroxidase family protein. | X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. | 0.459 |
KRN13556.1 | KRN13555.1 | IV37_GL000279 | IV37_GL000278 | Dyp-type peroxidase family protein. | HAD superfamily hydrolase. | 0.492 |
KRN13556.1 | ldh | IV37_GL000279 | IV37_GL001262 | Dyp-type peroxidase family protein. | Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate. | 0.463 |
KRN13556.1 | msrA | IV37_GL000279 | IV37_GL000280 | Dyp-type peroxidase family protein. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.406 |
ldh | KRN12653.1 | IV37_GL001262 | IV37_GL000952 | Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate. | X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. | 0.530 |
ldh | KRN13556.1 | IV37_GL001262 | IV37_GL000279 | Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate. | Dyp-type peroxidase family protein. | 0.463 |
msrA | KRN13556.1 | IV37_GL000280 | IV37_GL000279 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Dyp-type peroxidase family protein. | 0.406 |