STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13617.1N-acetylmuramoyl-L-alanine amidase. (254 aa)    
Predicted Functional Partners:
KRN13058.1
Cell wall anchor domain-containing protein.
  
 
 0.978
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
  
  0.960
KRN13214.1
Peptidoglycan binding domain protein.
    
 0.954
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.941
KRN12210.1
N-acetylmuramidase.
 
 
 0.901
KRN13418.1
Peptidase S54, rhomboid domain-containing protein.
  
   0.858
KRN13584.1
LysM domain-containing protein.
 
  
 0.833
KRN13618.1
Hypothetical protein; Belongs to the fructosamine kinase family.
       0.823
KRN13747.1
Muramidase.
  
 
 0.800
KRN12393.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase.
  
 
 0.800
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
Server load: low (20%) [HD]