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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13629.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
KRN13628.1
Hypothetical protein.
 
     0.939
KRN13630.1
ImpB MucB SamB family protein; Belongs to the DNA polymerase type-Y family.
 
     0.937
KRN13631.1
Hypothetical protein.
       0.543
KRN13632.1
DNA-entry nuclease.
       0.543
KRN13627.1
methylmalonyl-CoA epimerase.
       0.507
KRN12858.1
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
  0.499
KRN13176.1
Biotin carboxylase.
     
  0.499
KRN11983.1
Biotin carboxylase.
     
  0.499
KRN12770.1
Transport protein.
  
     0.433
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.